P. troglodytes Gene: PRRX2 - ENSPTRG00000021461 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000021461
NamePRRX2
Descriptionpaired related homeobox 2 [Source:HGNC Symbol;Acc:HGNC:21338]
OrganismPan troglodytes (chimpanzee)
Synonym(s)pmx2, prx2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000057fibroblast
  • UBERON:0000104life cycle
6.27e3
  • 6.27e3
74.78
  • 74.78
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.00e4
  • 1.00e4
  • 1.37e4
  • 1.38e4
59.63
  • 59.63
  • 44.82
  • 44.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
  • 1.96e4
57.01
  • 57.01
  • 20.98
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
49.89
  • 49.89
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
  • 1.48e4
48.22
  • 48.22
  • 40.60
AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
46.39
  • 46.39
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
  • 1.37e4
  • 1.63e4
  • 1.65e4
  • 2.05e4
45.63
  • 45.63
  • 44.70
  • 34.35
  • 33.51
  • 17.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
  • 1.74e4
40.73
  • 40.73
  • 30.08
AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
39.78
  • 39.78
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.53e4
  • 1.53e4
  • 1.69e4
38.55
  • 38.55
  • 32.17
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
  • 1.67e4
  • 1.69e4
  • 1.71e4
  • 1.94e4
  • 2.05e4
38.36
  • 38.36
  • 32.76
  • 31.97
  • 31.31
  • 21.74
  • 17.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.58e4
  • 1.58e4
36.44
  • 36.44
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.64e4
  • 1.64e4
34.15
  • 34.15
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
1.73e4
  • 1.73e4
30.21
  • 30.21
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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