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P. troglodytes Gene: LANCL3 - ENSPTRG00000021790 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000021790
NameLANCL3
DescriptionLanC lantibiotic synthetase component C-like 3 (bacterial) [Source:HGNC Symbol;Acc:HGNC:24767]
OrganismPan troglodytes (chimpanzee)
Synonym(s)flj42925
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
51.25
  • 51.25
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
  • 1.27e4
  • 1.32e4
  • 1.51e4
50.31
  • 50.31
  • 49.08
  • 47.01
  • 39.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
44.89
  • 44.89
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.38e4
  • 1.38e4
44.52
  • 44.52
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
1.38e4
  • 1.38e4
44.50
  • 44.50
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
42.48
  • 42.48
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
  • 1.60e4
42.39
  • 42.39
  • 35.40
AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.46e4
  • 1.46e4
  • 1.47e4
  • 1.48e4
  • 1.52e4
  • 1.66e4
41.31
  • 41.31
  • 40.68
  • 40.59
  • 38.75
  • 33.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
1.48e4
  • 1.48e4
  • 1.48e4
  • 1.49e4
  • 1.59e4
  • 1.60e4
  • 1.60e4
40.58
  • 40.58
  • 40.40
  • 40.07
  • 35.90
  • 35.61
  • 35.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.48e4
  • 1.48e4
40.46
  • 40.46
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
  • 1.67e4
38.76
  • 38.76
  • 32.79
AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
1.68e4
  • 1.68e4
32.47
  • 32.47
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria10 species10 genesCompare expression
Theria11 species11 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Bilateria20 species20 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000021790.

Cross-references

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