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P. troglodytes Gene: SEPT2 - ENSPTRG00000023481 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000023481
NameSEPT2
Descriptionseptin 2 [Source:HGNC Symbol;Acc:HGNC:7729]
OrganismPan troglodytes (chimpanzee)
Synonym(s)diff6, hnedd5, kiaa0158, nedd5, pnutl3
Orthologs(s)24 orthologs
Paralog(s)10 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000057fibroblast
  • UBERON:0000104life cycle
387
  • 387
98.45
  • 98.45
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
480
  • 480
98.07
  • 98.07
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
617
  • 617
97.52
  • 97.52
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
627
  • 627
97.48
  • 97.48
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
654
  • 654
  • 972
  • 1.06e3
  • 1.09e3
97.37
  • 97.37
  • 96.09
  • 95.73
  • 95.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
670
  • 670
  • 1.07e3
97.31
  • 97.31
  • 95.70
AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
692
  • 692
97.22
  • 97.22
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
757
  • 757
  • 1.01e3
  • 1.48e3
96.96
  • 96.96
  • 95.93
  • 94.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
841
  • 841
96.62
  • 96.62
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
942
  • 942
96.21
  • 96.21
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
957
  • 957
  • 1.30e3
  • 1.61e3
96.15
  • 96.15
  • 94.78
  • 93.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
988
  • 988
  • 1.09e3
  • 1.14e3
  • 1.16e3
  • 1.39e3
  • 1.47e3
96.03
  • 96.03
  • 95.62
  • 95.41
  • 95.35
  • 94.42
  • 94.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
992
  • 992
  • 1.58e3
96.01
  • 96.01
  • 93.63
AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0034919juvenile stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.03e3
  • 1.03e3
  • 1.39e3
  • 1.51e3
  • 1.68e3
  • 1.86e3
95.86
  • 95.86
  • 94.39
  • 93.93
  • 93.23
  • 92.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.08e3
  • 1.08e3
  • 1.30e3
  • 1.57e3
  • 2.00e3
95.67
  • 95.67
  • 94.78
  • 93.70
  • 91.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.23e3
  • 1.23e3
95.06
  • 95.06
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.31e3
  • 1.31e3
94.73
  • 94.73
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.31e3
  • 1.31e3
94.73
  • 94.73
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.40e3
  • 1.40e3
94.36
  • 94.36
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.47e3
  • 1.47e3
94.08
  • 94.08
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
1.48e3
  • 1.48e3
94.03
  • 94.03
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
1.92e3
  • 1.92e3
92.28
  • 92.28
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
2.15e3
  • 2.15e3
91.36
  • 91.36
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000023481.

Paralogs (same species)

Paralogy information comes from OMA : ENSPTRG00000023481.

Cross-references

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