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P. troglodytes Gene: C1D - ENSPTRG00000023558 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000023558
NameC1D
DescriptionC1D nuclear receptor corepressor [Source:HGNC Symbol;Acc:HGNC:29911]
OrganismPan troglodytes (chimpanzee)
Synonym(s)lrp1, rrp47, sun-cor, suncor
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.69e3
  • 2.69e3
  • 4.27e3
  • 4.65e3
  • 8.58e3
89.19
  • 89.19
  • 82.81
  • 81.27
  • 65.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
2.76e3
  • 2.76e3
88.88
  • 88.88
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.50e3
  • 3.50e3
  • 5.29e3
  • 6.45e3
  • 6.50e3
85.91
  • 85.91
  • 78.73
  • 74.04
  • 73.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
4.14e3
  • 4.14e3
83.33
  • 83.33
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
4.16e3
  • 4.16e3
  • 4.26e3
83.25
  • 83.25
  • 82.87
AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
4.19e3
  • 4.19e3
83.15
  • 83.15
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
4.22e3
  • 4.22e3
83.00
  • 83.00
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
4.48e3
  • 4.48e3
81.99
  • 81.99
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
4.58e3
  • 4.58e3
81.57
  • 81.57
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0007222late adult stage
  • UBERON:0000112sexually immature stage
4.60e3
  • 4.60e3
  • 4.75e3
  • 5.86e3
  • 5.89e3
  • 6.12e3
  • 8.48e3
81.47
  • 81.47
  • 80.90
  • 76.40
  • 76.31
  • 75.36
  • 65.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
4.64e3
  • 4.64e3
  • 4.76e3
  • 4.86e3
  • 4.92e3
  • 5.46e3
81.32
  • 81.32
  • 80.83
  • 80.43
  • 80.19
  • 78.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
4.82e3
  • 4.82e3
80.60
  • 80.60
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
5.01e3
  • 5.01e3
  • 7.23e3
79.82
  • 79.82
  • 70.91
AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
5.67e3
  • 5.67e3
77.20
  • 77.20
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
5.83e3
  • 5.83e3
76.54
  • 76.54
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
6.15e3
  • 6.15e3
  • 1.16e4
75.26
  • 75.26
  • 53.13
AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
6.85e3
  • 6.85e3
72.43
  • 72.43
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
6.96e3
  • 6.96e3
72.00
  • 72.00
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
7.28e3
  • 7.28e3
  • 8.34e3
  • 9.62e3
70.69
  • 70.69
  • 66.44
  • 61.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
7.29e3
  • 7.29e3
70.64
  • 70.64
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
7.67e3
  • 7.67e3
  • 9.91e3
  • 1.03e4
69.13
  • 69.13
  • 60.11
  • 58.63
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
7.70e3
  • 7.70e3
69.01
  • 69.01
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
9.17e3
  • 9.17e3
63.09
  • 63.09
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
57.67
  • 57.67
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species4 genesCompare expression
Euarchontoglires7 species8 genesCompare expression
Boreoeutheria11 species12 genesCompare expression
Mammalia12 species13 genesCompare expression
Amniota14 species15 genesCompare expression
Tetrapoda15 species16 genesCompare expression
Euteleostomi16 species17 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000023558.

Cross-references

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