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P. troglodytes Gene: LYZ - ENSPTRG00000029654 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000029654
NameLYZ
Descriptionlysozyme [Source:HGNC Symbol;Acc:HGNC:6740]
OrganismPan troglodytes (chimpanzee)
Orthologs(s)66 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
34.0
  • 34.0
99.87
  • 99.87
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
174
  • 174
99.31
  • 99.31
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
356
  • 356
98.57
  • 98.57
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
429
  • 429
98.28
  • 98.28
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
953
  • 953
96.17
  • 96.17
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.47e3
  • 1.47e3
  • 1.89e3
  • 2.56e3
  • 2.67e3
94.09
  • 94.09
  • 92.40
  • 89.71
  • 89.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
1.78e3
  • 1.78e3
  • 3.59e3
  • 6.07e3
  • 8.87e3
92.82
  • 92.82
  • 85.54
  • 75.56
  • 64.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
2.94e3
  • 2.94e3
88.15
  • 88.15
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.63e3
  • 3.63e3
  • 4.92e3
85.41
  • 85.41
  • 80.19
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.77e3
  • 3.77e3
  • 1.23e4
  • 1.34e4
84.85
  • 84.85
  • 50.37
  • 46.03
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
6.13e3
  • 6.13e3
75.31
  • 75.31
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
6.82e3
  • 6.82e3
72.55
  • 72.55
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
8.84e3
  • 8.84e3
  • 1.39e4
64.44
  • 64.44
  • 44.18
AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.91e3
  • 8.91e3
  • 1.27e4
64.15
  • 64.15
  • 48.83
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000112sexually immature stage
9.48e3
  • 9.48e3
  • 9.79e3
  • 1.38e4
  • 1.77e4
  • 1.94e4
  • 2.24e4
61.84
  • 61.84
  • 60.60
  • 44.59
  • 28.94
  • 21.76
  • 9.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
1.03e4
  • 1.03e4
  • 1.27e4
  • 1.35e4
  • 1.60e4
58.47
  • 58.47
  • 48.71
  • 45.56
  • 35.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
57.52
  • 57.52
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
54.75
  • 54.75
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
50.63
  • 50.63
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.28e4
  • 1.28e4
  • 1.37e4
48.54
  • 48.54
  • 44.66
AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
44.68
  • 44.68
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
39.57
  • 39.57
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
2.01e4
  • 2.01e4
19.11
  • 19.11
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species13 genesCompare expression
Boreoeutheria11 species17 genesCompare expression
Theria12 species21 genesCompare expression
Mammalia13 species22 genesCompare expression
Tetrapoda14 species23 genesCompare expression
Bilateria20 species66 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000029654.

Cross-references

EnsemblENSPTRG00000029654 (LYZ)
HGNCHGNC:6740 (LYZ)
EMBLAACZ03084649
Uniprot/SPTREMBLH2R791, H2R791_PANTR

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