P. troglodytes Gene: XCR1 - ENSPTRG00000030255 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000030255
NameXCR1
Descriptionchemokine (C motif) receptor 1 [Source:HGNC Symbol;Acc:HGNC:1625]
OrganismPan troglodytes (chimpanzee)
Synonym(s)ccxcr1, gpr5
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
41.77
  • 41.77
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.46e4
  • 1.46e4
  • 1.73e4
  • 1.79e4
41.41
  • 41.41
  • 30.55
  • 27.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.52e4
  • 1.52e4
  • 1.62e4
  • 1.85e4
38.97
  • 38.97
  • 34.68
  • 25.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
38.46
  • 38.46
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
1.63e4
  • 1.63e4
34.42
  • 34.42
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.66e4
  • 1.66e4
33.37
  • 33.37
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.77e4
  • 1.77e4
  • 2.22e4
28.94
  • 28.94
  • 10.51
AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.77e4
  • 1.77e4
28.91
  • 28.91
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.84e4
  • 1.84e4
  • 1.91e4
  • 2.04e4
25.92
  • 25.92
  • 23.28
  • 18.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.84e4
  • 1.84e4
  • 1.95e4
  • 1.97e4
  • 2.09e4
25.91
  • 25.91
  • 21.34
  • 20.84
  • 16.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species20 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000030255.

Cross-references

EnsemblENSPTRG00000030255 (XCR1)
HGNCHGNC:1625 (XCR1)
EMBLAACZ03028343
Uniprot/SPTREMBLH2R8C2, H2R8C2_PANTR

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