P. troglodytes Gene: KCNF1 - ENSPTRG00000030563 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000030563
NameKCNF1
Descriptionpotassium channel, voltage gated modifier subfamily F, member 1 [Source:HGNC Symbol;Acc:HGNC:6246]
OrganismPan troglodytes (chimpanzee)
Synonym(s)ik8, kcnf, kh1, kv5.1
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000956cerebral cortex
  • UBERON:0000104life cycle
1.06e3
  • 1.06e3
95.73
  • 95.73
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.34e3
  • 1.34e3
94.60
  • 94.60
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
1.57e3
  • 1.57e3
  • 2.12e3
  • 2.56e3
  • 2.89e3
  • 3.75e3
  • 7.42e3
93.68
  • 93.68
  • 91.49
  • 89.70
  • 88.37
  • 84.91
  • 70.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
1.84e3
  • 1.84e3
  • 2.11e3
  • 2.23e3
  • 2.33e3
  • 2.42e3
92.59
  • 92.59
  • 91.53
  • 91.03
  • 90.64
  • 90.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.85e3
  • 1.85e3
92.57
  • 92.57
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
2.67e3
  • 2.67e3
89.25
  • 89.25
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
6.86e3
  • 6.86e3
72.40
  • 72.40
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
  • 1.38e4
  • 1.45e4
52.21
  • 52.21
  • 44.40
  • 41.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
52.14
  • 52.14
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
  • 1.78e4
51.83
  • 51.83
  • 28.44
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.35e4
  • 1.35e4
  • 1.47e4
  • 1.61e4
45.63
  • 45.63
  • 40.79
  • 35.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.61e4
  • 1.61e4
35.18
  • 35.18
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.68e4
  • 1.68e4
32.38
  • 32.38
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.73e4
  • 1.73e4
30.18
  • 30.18
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.84e4
  • 1.84e4
26.07
  • 26.07
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000030563.

Cross-references

EnsemblENSPTRG00000030563 (KCNF1)
HGNCHGNC:6246 (KCNF1)
EMBLAACZ03013746, AACZ03013747
Uniprot/SPTREMBLH2R8Z5, H2R8Z5_PANTR

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