P. troglodytes Gene: PKHD1L1 - ENSPTRG00000030951 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000030951
NamePKHD1L1
Descriptionpolycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:HGNC Symbol;Acc:HGNC:20313]
OrganismPan troglodytes (chimpanzee)
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
5.64e3
  • 5.64e3
77.31
  • 77.31
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
58.20
  • 58.20
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
55.42
  • 55.42
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
52.00
  • 52.00
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.32e4
  • 1.32e4
  • 1.43e4
  • 1.51e4
46.68
  • 46.68
  • 42.24
  • 39.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.38e4
  • 1.38e4
  • 1.42e4
  • 1.51e4
44.50
  • 44.50
  • 42.76
  • 39.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.43e4
  • 1.43e4
42.24
  • 42.24
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
40.74
  • 40.74
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.73e4
  • 1.73e4
  • 1.73e4
30.48
  • 30.48
  • 30.47
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.78e4
  • 1.78e4
28.28
  • 28.28
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018685nursing stage
1.85e4
  • 1.85e4
25.36
  • 25.36
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species16 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000030951.

Cross-references

EnsemblENSPTRG00000030951 (PKHD1L1)
HGNCHGNC:20313 (PKHD1L1)
EMBLAACZ03062497, AACZ03062498, AACZ03062499, AACZ03062500, AACZ03062501, AACZ03062502, AACZ03062503, AACZ03062504, AACZ03062505, AACZ03062506, AACZ03062507, AACZ03062508, AACZ03062509, AACZ03062510
Uniprot/SPTREMBLH2R9Q7, H2R9Q7_PANTR

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