P. troglodytes Gene: HMGN1 - ENSPTRG00000031426 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000031426
NameHMGN1
Descriptionhigh mobility group nucleosome binding domain 1 [Source:HGNC Symbol;Acc:HGNC:4984]
OrganismPan troglodytes (chimpanzee)
Synonym(s)flj27265, flj31471, hmg14, mgc104230, mgc117425

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
708
  • 708
  • 1.08e3
96.66918
  • 96.66918
  • 94.90248
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
995
  • 995
95.31706
  • 95.31706
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.02e3
  • 1.02e3
  • 1.42e3
95.20871
  • 95.20871
  • 93.31951
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.18e3
  • 1.18e3
  • 2.28e3
94.44549
  • 94.44549
  • 89.27259
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.23e3
  • 1.23e3
  • 1.35e3
94.23349
  • 94.23349
  • 93.66814
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.79e3
  • 1.79e3
  • 2.29e3
  • 2.44e3
91.58108
  • 91.58108
  • 89.21728
  • 88.50367
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAL954225
EnsemblENSPTRG00000031426 (HMGN1)
HGNCHGNC:4984 (HMGN1)
Uniprot/SPTREMBLH2RAI4, H2RAI4_PANTR

Do not show this banner again