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P. troglodytes Gene: TMEM249 - ENSPTRG00000033834 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000033834
NameTMEM249
Descriptiontransmembrane protein 249 [Source:HGNC Symbol;Acc:HGNC:44155]
OrganismPan troglodytes (chimpanzee)
Synonym(s)c8orfk29
Orthologs(s)12 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002129cerebellar cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
3.30e3
  • 3.30e3
  • 5.81e3
  • 7.84e3
86.73
  • 86.73
  • 76.61
  • 68.43
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
3.84e3
  • 3.84e3
  • 5.36e3
84.55
  • 84.55
  • 78.41
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.28e3
  • 5.28e3
  • 8.52e3
  • 1.12e4
78.76
  • 78.76
  • 65.71
  • 54.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.82e3
  • 8.82e3
  • 9.11e3
  • 9.65e3
  • 1.23e4
  • 1.34e4
  • 1.68e4
64.49
  • 64.49
  • 63.32
  • 61.15
  • 50.68
  • 45.89
  • 32.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
9.26e3
  • 9.26e3
  • 1.01e4
  • 1.10e4
  • 1.17e4
  • 1.34e4
62.71
  • 62.71
  • 59.30
  • 55.79
  • 52.83
  • 45.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
53.21
  • 53.21
AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
48.12
  • 48.12
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
  • 1.41e4
  • 1.74e4
  • 1.88e4
43.36
  • 43.36
  • 43.11
  • 29.86
  • 24.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.53e4
  • 1.53e4
38.60
  • 38.60
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
  • 1.76e4
  • 1.76e4
  • 2.00e4
37.48
  • 37.48
  • 29.14
  • 29.08
  • 19.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
1.57e4
  • 1.57e4
36.68
  • 36.68
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.68e4
  • 1.68e4
32.38
  • 32.38
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.71e4
  • 1.71e4
31.02
  • 31.02
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.86e4
  • 1.86e4
25.10
  • 25.10
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Euarchontoglires4 species4 genesCompare expression
Boreoeutheria9 species9 genesCompare expression
Theria10 species11 genesCompare expression
Amniota11 species12 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000033834.

Cross-references

EnsemblENSPTRG00000033834 (TMEM249)
HGNCHGNC:44155 (TMEM249)
EMBLAACZ03064850
Uniprot/SPTREMBLH2RDQ9, H2RDQ9_PANTR

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