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P. troglodytes Gene: - ENSPTRG00000040409 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000040409
Name-
Description-
OrganismPan troglodytes (chimpanzee)
Orthologs(s)27 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
5.23e3
  • 5.23e3
  • 1.05e4
78.96
  • 78.96
  • 57.57
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.23e3
  • 5.23e3
  • 5.55e3
  • 1.68e4
78.93
  • 78.93
  • 77.68
  • 32.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
5.42e3
  • 5.42e3
  • 7.59e3
  • 9.84e3
  • 1.74e4
78.18
  • 78.18
  • 69.43
  • 60.38
  • 29.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
5.97e3
  • 5.97e3
75.97
  • 75.97
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.49e3
  • 6.49e3
  • 7.90e3
73.86
  • 73.86
  • 68.19
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
6.72e3
  • 6.72e3
72.94
  • 72.94
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
7.08e3
  • 7.08e3
71.49
  • 71.49
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.19e3
  • 7.19e3
  • 1.21e4
  • 2.15e4
71.05
  • 71.05
  • 51.13
  • 13.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
8.15e3
  • 8.15e3
67.18
  • 67.18
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
8.26e3
  • 8.26e3
66.74
  • 66.74
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
8.74e3
  • 8.74e3
64.81
  • 64.81
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
8.97e3
  • 8.97e3
63.91
  • 63.91
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
8.99e3
  • 8.99e3
63.80
  • 63.80
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
9.69e3
  • 9.69e3
  • 1.56e4
  • 1.76e4
  • 1.85e4
60.98
  • 60.98
  • 37.05
  • 29.13
  • 25.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
54.47
  • 54.47
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.14e4
  • 1.14e4
  • 1.25e4
  • 1.46e4
54.26
  • 54.26
  • 49.49
  • 41.40
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
50.67
  • 50.67
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
46.11
  • 46.11
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0000112sexually immature stage
1.49e4
  • 1.49e4
  • 1.54e4
  • 1.71e4
  • 1.76e4
  • 2.24e4
39.84
  • 39.84
  • 38.20
  • 31.26
  • 29.19
  • 9.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
39.16
  • 39.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Homininae2 species2 genesCompare expression
Catarrhini3 species4 genesCompare expression
Euarchontoglires7 species9 genesCompare expression
Boreoeutheria12 species14 genesCompare expression
Theria13 species15 genesCompare expression
Mammalia14 species16 genesCompare expression
Amniota16 species18 genesCompare expression
Tetrapoda17 species19 genesCompare expression
Euteleostomi18 species20 genesCompare expression
Bilateria25 species27 genesCompare expression

Orthology information comes from OMA : ENSPTRG00000040409.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Homininae1 geneCompare expression
Bilateria2 genesCompare expression

Paralogy information comes from OMA : ENSPTRG00000040409.

Cross-references

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