P. troglodytes Gene: Metazoa_SRP - ENSPTRG00000040622 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000040622
NameMetazoa_SRP
DescriptionMetazoan signal recognition particle RNA [Source:RFAM;Acc:RF00017]
OrganismPan troglodytes (chimpanzee)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 1.35e4
  • 1.37e4
  • 1.63e4
52.68453
  • 52.68453
  • 45.75190
  • 44.83138
  • 34.45941
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
  • 1.45e4
  • 1.79e4
  • 1.87e4
  • 2.07e4
  • 2.13e4
48.76705
  • 48.76705
  • 41.49160
  • 28.14380
  • 24.53240
  • 16.82402
  • 14.31964
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.35e4
  • 1.35e4
  • 1.72e4
  • 1.81e4
  • 1.93e4
45.59143
  • 45.59143
  • 30.82442
  • 27.17304
  • 22.47056
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
  • 1.91e4
  • 2.15e4
43.51563
  • 43.51563
  • 23.02341
  • 13.48000
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
41.01568
  • 41.01568
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
40.71778
  • 40.71778
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
39.81200
  • 39.81200
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
1.50e4
  • 1.50e4
39.57332
  • 39.57332
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.59e4
  • 1.59e4
36.12077
  • 36.12077
AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.61e4
  • 1.61e4
35.28431
  • 35.28431
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.63e4
  • 1.63e4
34.57330
  • 34.57330
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
1.66e4
  • 1.66e4
33.20988
  • 33.20988
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.80e4
  • 1.80e4
27.49876
  • 27.49876
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
1.91e4
  • 1.91e4
22.93718
  • 22.93718
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.97e4
  • 1.97e4
20.68509
  • 20.68509
AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
2.03e4
  • 2.03e4
18.24859
  • 18.24859
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSPTRG00000040622 (Metazoa_SRP)

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