P. troglodytes Gene: Metazoa_SRP - ENSPTRG00000040898 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000040898
NameMetazoa_SRP
DescriptionMetazoan signal recognition particle RNA [Source:RFAM;Acc:RF00017]
OrganismPan troglodytes (chimpanzee)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.36e3
  • 8.36e3
  • 1.03e4
  • 1.30e4
66.35736
  • 66.35736
  • 58.36235
  • 47.83148
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
50.81766
  • 50.81766
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
  • 1.44e4
47.68837
  • 47.68837
  • 42.10261
AEIR
  • AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.32e4
  • 1.32e4
  • 1.49e4
  • 1.89e4
46.71605
  • 46.71605
  • 39.86437
  • 23.97677
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.32e4
  • 1.32e4
46.66871
  • 46.66871
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
  • 1.51e4
  • 2.08e4
45.48620
  • 45.48620
  • 39.33713
  • 16.42833
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.40e4
  • 1.40e4
43.56193
  • 43.56193
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.40e4
  • 1.40e4
  • 1.67e4
  • 1.99e4
43.53145
  • 43.53145
  • 32.85864
  • 19.91812
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.45e4
  • 1.45e4
  • 1.72e4
41.57726
  • 41.57726
  • 30.65667
AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
41.27993
  • 41.27993
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.65e4
  • 1.65e4
  • 1.67e4
  • 1.68e4
  • 1.92e4
  • 1.94e4
  • 2.24e4
33.75319
  • 33.75319
  • 32.57628
  • 32.54882
  • 22.56154
  • 21.88515
  • 9.69687
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.68e4
  • 1.68e4
32.37801
  • 32.37801
AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.69e4
  • 1.69e4
32.02597
  • 32.02597
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.75e4
  • 1.75e4
29.73825
  • 29.73825
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.84e4
  • 1.84e4
25.87359
  • 25.87359
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
1.98e4
  • 1.98e4
20.19883
  • 20.19883
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSPTRG00000040898 (Metazoa_SRP)

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