P. troglodytes Gene: Metazoa_SRP - ENSPTRG00000041511 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000041511
NameMetazoa_SRP
DescriptionMetazoan signal recognition particle RNA [Source:RFAM;Acc:RF00017]
OrganismPan troglodytes (chimpanzee)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001155colon
  • UBERON:0018241prime adult stage
1.18e4
  • 1.18e4
52.48485
  • 52.48485
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 1.31e4
  • 1.53e4
52.34798
  • 52.34798
  • 47.30879
  • 38.41279
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
  • 1.60e4
  • 1.87e4
52.23526
  • 52.23526
  • 35.54276
  • 24.91939
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
47.83519
  • 47.83519
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
  • 1.39e4
  • 1.67e4
  • 2.16e4
46.71605
  • 46.71605
  • 44.12725
  • 32.79910
  • 13.05666
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
45.46004
  • 45.46004
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
42.78440
  • 42.78440
AEIR
  • AEIR
UBERON:0001871temporal lobe
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
41.84095
  • 41.84095
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
40.78219
  • 40.78219
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.57e4
  • 1.57e4
36.66798
  • 36.66798
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.61e4
  • 1.61e4
  • 1.79e4
35.23882
  • 35.23882
  • 28.01377
AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.64e4
  • 1.64e4
33.86679
  • 33.86679
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
1.65e4
  • 1.65e4
  • 1.66e4
  • 1.76e4
33.67420
  • 33.67420
  • 33.04450
  • 29.16692
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
1.69e4
  • 1.69e4
31.88837
  • 31.88837
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.70e4
  • 1.70e4
  • 1.90e4
31.37819
  • 31.37819
  • 23.57308
AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.71e4
  • 1.71e4
31.19643
  • 31.19643
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.72e4
  • 1.72e4
  • 1.76e4
  • 1.78e4
  • 1.92e4
  • 2.01e4
  • 2.24e4
30.70820
  • 30.70820
  • 29.04752
  • 28.16276
  • 22.85578
  • 19.01230
  • 9.69687
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013541Brodmann (1909) area 10
  • UBERON:0018241prime adult stage
1.79e4
  • 1.79e4
27.98140
  • 27.98140
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0018685nursing stage
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.86e4
  • 1.86e4
  • 1.92e4
  • 1.93e4
  • 2.16e4
25.27385
  • 25.27385
  • 22.88545
  • 22.47676
  • 13.07027
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
1.87e4
  • 1.87e4
24.60470
  • 24.60470
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.94e4
  • 1.94e4
22.01083
  • 22.01083
AEIR
  • AEIR
UBERON:0009834dorsolateral prefrontal cortex
  • UBERON:0018241prime adult stage
2.00e4
  • 2.00e4
19.34631
  • 19.34631
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSPTRG00000041511 (Metazoa_SRP)

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