P. troglodytes Gene: Metazoa_SRP - ENSPTRG00000041987 - Pan troglodytes (chimpanzee)

General information

Ensembl IDENSPTRG00000041987
NameMetazoa_SRP
DescriptionMetazoan signal recognition particle RNA [Source:RFAM;Acc:RF00017]
OrganismPan troglodytes (chimpanzee)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0018241prime adult stage
9.56e3
  • 9.56e3
61.53338
  • 61.53338
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
58.77700
  • 58.77700
AEIR
  • AEIR
UBERON:0002371bone marrow
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
54.37290
  • 54.37290
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
51.42610
  • 51.42610
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
47.18097
  • 47.18097
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
  • 2.04e4
46.00242
  • 46.00242
  • 17.87476
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
  • 1.76e4
  • 2.16e4
45.72372
  • 45.72372
  • 29.31833
  • 13.05666
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.37e4
  • 1.37e4
  • 1.44e4
  • 1.98e4
44.68710
  • 44.68710
  • 41.92895
  • 20.36658
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
44.00125
  • 44.00125
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.53e4
  • 1.53e4
  • 1.55e4
38.51774
  • 38.51774
  • 37.54953
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.64e4
  • 1.64e4
  • 2.07e4
34.06735
  • 34.06735
  • 16.70212
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
1.66e4
  • 1.66e4
  • 1.99e4
  • 2.08e4
  • 2.11e4
  • 2.24e4
33.20811
  • 33.20811
  • 19.88559
  • 16.15334
  • 15.00980
  • 9.69687
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000057fibroblast
  • UBERON:0000104life cycle
1.66e4
  • 1.66e4
32.99825
  • 32.99825
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0018685nursing stage
1.73e4
  • 1.73e4
  • 2.25e4
30.49657
  • 30.49657
  • 9.49437
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.83e4
  • 1.83e4
  • 2.15e4
26.21336
  • 26.21336
  • 13.48000
AEIR
  • AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.94e4
  • 1.94e4
21.92589
  • 21.92589
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
1.99e4
  • 1.99e4
  • 2.05e4
19.71156
  • 19.71156
  • 17.60363
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSPTRG00000041987 (Metazoa_SRP)

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