R. norvegicus Gene: Tmco5b - ENSRNOG00000000009 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000009
NameTmco5b
Descriptiontransmembrane and coiled-coil domains 5B [Source:RGD Symbol;Acc:1561237]
OrganismRattus norvegicus (rat)
Synonym(s)loc366158, rgd1561237

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.05e3
  • 4.05e3
  • 5.38e3
85.22085
  • 85.22085
  • 80.37418
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.75e4
  • 1.75e4
36.18160
  • 36.18160
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
2.06e4
  • 2.06e4
24.87986
  • 24.87986
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.08e4
  • 2.08e4
24.17310
  • 24.17310
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
2.17e4
  • 2.17e4
20.93737
  • 20.93737
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.21e4
  • 2.21e4
  • 2.22e4
19.53897
  • 19.53897
  • 19.00303
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07053402
EnsemblENSRNOG00000000009 (Tmco5b)
RGD1561237 (Tmco5b)
Uniprot/SPTREMBLD3ZEL3, D3ZEL3_RAT

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