R. norvegicus Gene: Tmcc2 - ENSRNOG00000000033 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000033
NameTmcc2
Descriptiontransmembrane and coiled-coil domain family 2 [Source:RGD Symbol;Acc:1311960]
OrganismRattus norvegicus (rat)
Synonym(s)loc305095, rgd1311960, rgd1311960_predicted

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
563
  • 563
  • 1.64e3
97.95018
  • 97.95018
  • 94.02389
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.24e3
  • 1.24e3
  • 3.15e3
95.47671
  • 95.47671
  • 88.52657
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.19e3
  • 2.19e3
92.03388
  • 92.03388
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
2.69e3
  • 2.69e3
90.18941
  • 90.18941
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
2.85e3
  • 2.85e3
89.60317
  • 89.60317
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
2.89e3
  • 2.89e3
  • 2.90e3
89.47102
  • 89.47102
  • 89.42623
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
3.14e3
  • 3.14e3
88.53478
  • 88.53478
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
3.21e3
  • 3.21e3
88.28792
  • 88.28792
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.26e3
  • 5.26e3
80.82409
  • 80.82409
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
6.72e3
  • 6.72e3
75.47850
  • 75.47850
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.70e3
  • 7.70e3
  • 1.43e4
71.93712
  • 71.93712
  • 47.74242
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
60.39114
  • 60.39114
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
1.16e4
  • 1.16e4
  • 1.16e4
57.84010
  • 57.84010
  • 57.62107
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.17e4
  • 1.17e4
57.43488
  • 57.43488
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
56.08017
  • 56.08017
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
54.88759
  • 54.88759
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
54.16621
  • 54.16621
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
54.11920
  • 54.11920
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
53.54707
  • 53.54707
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
51.48740
  • 51.48740
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
50.15064
  • 50.15064
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07020967, AABR07020968, CH473958
EnsemblENSRNOG00000000033 (Tmcc2)
RGD1311960 (Tmcc2)
Uniprot/SPTREMBLD3ZE26, D3ZE26_RAT

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