R. norvegicus Gene: Hltf - ENSRNOG00000000082 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000082
NameHltf
Descriptionhelicase-like transcription factor [Source:RGD Symbol;Acc:1309031]
OrganismRattus norvegicus (rat)
Synonym(s)loc295568, smarca3, smarca3_predicted, snf2l3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.23e3
  • 2.23e3
91.85381
  • 91.85381
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
3.14e3
  • 3.14e3
88.55090
  • 88.55090
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
3.20e3
  • 3.20e3
88.34603
  • 88.34603
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
3.54e3
  • 3.54e3
87.08546
  • 87.08546
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
3.70e3
  • 3.70e3
86.52325
  • 86.52325
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
4.24e3
  • 4.24e3
84.52198
  • 84.52198
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
5.43e3
  • 5.43e3
80.18580
  • 80.18580
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
5.92e3
  • 5.92e3
78.40172
  • 78.40172
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
6.13e3
  • 6.13e3
77.62859
  • 77.62859
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
6.16e3
  • 6.16e3
77.53000
  • 77.53000
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
6.29e3
  • 6.29e3
77.05420
  • 77.05420
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
6.49e3
  • 6.49e3
  • 8.58e3
76.32144
  • 76.32144
  • 68.71871
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.90e3
  • 6.90e3
  • 9.91e3
74.83539
  • 74.83539
  • 63.84046
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
6.98e3
  • 6.98e3
74.53770
  • 74.53770
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
7.56e3
  • 7.56e3
72.41952
  • 72.41952
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
8.57e3
  • 8.57e3
68.76102
  • 68.76102
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
8.61e3
  • 8.61e3
68.59222
  • 68.59222
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.72e3
  • 8.72e3
  • 9.03e3
68.21680
  • 68.21680
  • 67.07696
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
9.92e3
  • 9.92e3
63.80352
  • 63.80352
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
60.68968
  • 60.68968
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
  • 1.21e4
55.96564
  • 55.96564
  • 55.84597
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

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