R. norvegicus Gene: Pdzk1 - ENSRNOG00000000096 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000096
NamePdzk1
DescriptionPDZ domain containing 1 [Source:RGD Symbol;Acc:70924]
OrganismRattus norvegicus (rat)
Synonym(s)clamp, diphor1, nherf3, o35234, q6az21

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
234
  • 234
99.15144
  • 99.15144
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
727
  • 727
97.35029
  • 97.35029
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.19e3
  • 1.19e3
95.65153
  • 95.65153
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
2.29e3
  • 2.29e3
  • 2.52e3
91.65649
  • 91.65649
  • 90.79779
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.75e3
  • 3.75e3
  • 1.05e4
86.31506
  • 86.31506
  • 61.53547
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
4.55e3
  • 4.55e3
83.42269
  • 83.42269
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.01e3
  • 5.01e3
  • 1.41e4
81.72302
  • 81.72302
  • 48.45691
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
8.86e3
  • 8.86e3
67.68323
  • 67.68323
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
9.55e3
  • 9.55e3
65.17223
  • 65.17223
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
9.67e3
  • 9.67e3
64.72812
  • 64.72812
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
61.76004
  • 61.76004
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
61.62873
  • 61.62873
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
  • 1.06e4
61.60929
  • 61.60929
  • 61.37874
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
59.26319
  • 59.26319
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
58.29744
  • 58.29744
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
57.88168
  • 57.88168
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
56.46774
  • 56.46774
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
55.82668
  • 55.82668
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
55.48674
  • 55.48674
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
54.22464
  • 54.22464
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07012594, AF013145, AF116896, BC078788
EnsemblENSRNOG00000000096 (Pdzk1)
RGD70924 (Pdzk1)
Uniprot/SPTREMBLA0A0G2K8W0, A0A0G2K8W0_RAT
Uniprot/SWISSPROTNHRF3_RAT, Q9JJ40

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