R. norvegicus Gene: Champ1 - ENSRNOG00000000112 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000112
NameChamp1
Descriptionchromosome alignment maintaining phosphoprotein 1 [Source:RGD Symbol;Acc:1311283]
OrganismRattus norvegicus (rat)
Synonym(s)loc306647, rgd1311283, zfp828, zfp828 {eco:0000313|embl:aai68662.1,gn eco:0000313|rgd:1311283}

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.65e3
  • 4.65e3
  • 7.46e3
83.02878
  • 83.02878
  • 72.80184
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
6.28e3
  • 6.28e3
77.11030
  • 77.11030
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
6.76e3
  • 6.76e3
  • 7.86e3
75.36062
  • 75.36062
  • 71.33866
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
6.91e3
  • 6.91e3
74.80457
  • 74.80457
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
6.99e3
  • 6.99e3
74.52238
  • 74.52238
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
7.06e3
  • 7.06e3
74.25320
  • 74.25320
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
7.34e3
  • 7.34e3
73.22322
  • 73.22322
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
7.37e3
  • 7.37e3
73.13346
  • 73.13346
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.37e3
  • 7.37e3
  • 1.02e4
73.10793
  • 73.10793
  • 62.77806
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
7.42e3
  • 7.42e3
72.95317
  • 72.95317
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
7.42e3
  • 7.42e3
72.95061
  • 72.95061
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.44e3
  • 7.44e3
  • 8.28e3
72.88445
  • 72.88445
  • 69.79797
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
7.63e3
  • 7.63e3
72.17715
  • 72.17715
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
7.75e3
  • 7.75e3
71.72729
  • 71.72729
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
7.77e3
  • 7.77e3
71.64723
  • 71.64723
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
7.78e3
  • 7.78e3
71.62166
  • 71.62166
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
7.82e3
  • 7.82e3
71.48908
  • 71.48908
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
7.84e3
  • 7.84e3
71.41365
  • 71.41365
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
7.89e3
  • 7.89e3
71.23226
  • 71.23226
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
7.96e3
  • 7.96e3
70.96615
  • 70.96615
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
8.38e3
  • 8.38e3
69.42094
  • 69.42094
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.08e4
  • 1.08e4
  • 1.08e4
60.69151
  • 60.69151
  • 60.44483
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07026523, BC168662, CH473970
EnsemblENSRNOG00000000112 (Champ1)
RGD1311283 (Champ1)
Uniprot/SPTREMBLB5DEG7, B5DEG7_RAT

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