R. norvegicus Gene: Chm - ENSRNOG00000000161 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000161
NameChm
Descriptionchoroideremia (Rab escort protein 1) [Source:RGD Symbol;Acc:2340]
OrganismRattus norvegicus (rat)
Synonym(s)rep-1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
6.12e3
  • 6.12e3
77.66703
  • 77.66703
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.66e3
  • 6.66e3
  • 9.60e3
75.69417
  • 75.69417
  • 64.97425
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
6.90e3
  • 6.90e3
74.83029
  • 74.83029
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
7.14e3
  • 7.14e3
73.97629
  • 73.97629
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
7.44e3
  • 7.44e3
72.87398
  • 72.87398
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
7.47e3
  • 7.47e3
72.77521
  • 72.77521
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
7.54e3
  • 7.54e3
72.51523
  • 72.51523
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
7.82e3
  • 7.82e3
71.48353
  • 71.48353
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
7.89e3
  • 7.89e3
71.24237
  • 71.24237
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
8.07e3
  • 8.07e3
  • 1.73e4
70.55637
  • 70.55637
  • 36.77984
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
8.66e3
  • 8.66e3
68.42444
  • 68.42444
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
8.68e3
  • 8.68e3
68.35905
  • 68.35905
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
8.68e3
  • 8.68e3
68.35511
  • 68.35511
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
8.79e3
  • 8.79e3
67.95204
  • 67.95204
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
8.82e3
  • 8.82e3
67.84856
  • 67.84856
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
8.84e3
  • 8.84e3
67.76635
  • 67.76635
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
8.94e3
  • 8.94e3
67.38159
  • 67.38159
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
  • 1.52e4
58.03698
  • 58.03698
  • 44.39957
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
50.04417
  • 50.04417
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.45e4
  • 1.45e4
  • 1.45e4
47.21574
  • 47.21574
  • 47.05518
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

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