R. norvegicus Gene: Lamp2 - ENSRNOG00000000164 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000164
NameLamp2
Descriptionlysosomal-associated membrane protein 2 [Source:RGD Symbol;Acc:2990]
OrganismRattus norvegicus (rat)
Synonym(s)lamp-2, lgp-110, lgp-96, lgp-b

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
505
  • 505
  • 713
98.16344
  • 98.16344
  • 97.40249
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
625
  • 625
97.72455
  • 97.72455
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
627
  • 627
97.71839
  • 97.71839
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
658
  • 658
97.60404
  • 97.60404
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
730
  • 730
  • 1.88e3
97.34107
  • 97.34107
  • 93.12988
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
825
  • 825
96.99628
  • 96.99628
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
870
  • 870
96.83043
  • 96.83043
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
939
  • 939
96.57840
  • 96.57840
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.00e3
  • 1.00e3
96.34621
  • 96.34621
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.35e3
  • 1.35e3
95.08294
  • 95.08294
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.42e3
  • 1.42e3
94.82639
  • 94.82639
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.45e3
  • 1.45e3
94.73309
  • 94.73309
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.50e3
  • 1.50e3
94.54703
  • 94.54703
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.50e3
  • 1.50e3
94.51672
  • 94.51672
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.51e3
  • 1.51e3
94.50669
  • 94.50669
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.52e3
  • 1.52e3
94.45990
  • 94.45990
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.60e3
  • 1.60e3
94.18200
  • 94.18200
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.73e3
  • 1.73e3
  • 2.08e3
93.69989
  • 93.69989
  • 92.41919
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.75e3
  • 1.75e3
  • 3.69e3
93.60616
  • 93.60616
  • 86.53157
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
2.40e3
  • 2.40e3
  • 3.05e3
91.26659
  • 91.26659
  • 88.88245
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
2.41e3
  • 2.41e3
91.23077
  • 91.23077
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
3.65e3
  • 3.65e3
86.68560
  • 86.68560
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAABR06107907
EnsemblENSRNOG00000000164 (Lamp2)
RGD2990 (Lamp2)
Uniprot/SPTREMBLF1LLX8, F1LLX8_RAT

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