R. norvegicus Gene: Gatm - ENSRNOG00000000168 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000168
NameGatm
Descriptionglycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:RGD Symbol;Acc:71090]
OrganismRattus norvegicus (rat)
Synonym(s)at, mgc93388

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
58.1
  • 58.1
99.79163
  • 99.79163
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
288
  • 288
98.95299
  • 98.95299
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.34e3
  • 1.34e3
95.10938
  • 95.10938
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.77e3
  • 1.77e3
  • 1.93e3
93.56585
  • 93.56585
  • 92.94879
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.86e3
  • 1.86e3
  • 2.01e3
93.23092
  • 93.23092
  • 92.66006
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.52e3
  • 3.52e3
  • 5.66e3
87.16311
  • 87.16311
  • 79.34493
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
3.89e3
  • 3.89e3
85.82598
  • 85.82598
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
4.06e3
  • 4.06e3
85.20626
  • 85.20626
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
4.63e3
  • 4.63e3
83.10194
  • 83.10194
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
5.42e3
  • 5.42e3
80.24361
  • 80.24361
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
6.00e3
  • 6.00e3
78.10519
  • 78.10519
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
6.60e3
  • 6.60e3
  • 9.12e3
75.92118
  • 75.92118
  • 66.74629
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
8.20e3
  • 8.20e3
70.07904
  • 70.07904
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
8.22e3
  • 8.22e3
70.01470
  • 70.01470
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.00e4
  • 1.00e4
63.35938
  • 63.35938
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
63.22993
  • 63.22993
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
62.79155
  • 62.79155
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
58.02498
  • 58.02498
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
57.84645
  • 57.84645
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
54.91735
  • 54.91735
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EnsemblENSRNOG00000000168 (Gatm)
RGD71090 (Gatm)

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