R. norvegicus Gene: Spata5l1 - ENSRNOG00000000169 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000169
NameSpata5l1
Descriptionspermatogenesis associated 5-like 1 [Source:RGD Symbol;Acc:1595990]
OrganismRattus norvegicus (rat)
Synonym(s)loc362206, loc691729

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.15e3
  • 6.15e3
  • 1.38e4
77.56137
  • 77.56137
  • 49.83175
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.22e3
  • 7.22e3
  • 1.54e4
73.66233
  • 73.66233
  • 43.89401
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
9.36e3
  • 9.36e3
65.85589
  • 65.85589
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
62.96914
  • 62.96914
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.04e4
  • 1.04e4
62.24302
  • 62.24302
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
61.44367
  • 61.44367
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
61.06295
  • 61.06295
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
59.67706
  • 59.67706
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
59.32308
  • 59.32308
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
58.85567
  • 58.85567
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
58.09169
  • 58.09169
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
1.15e4
  • 1.15e4
  • 1.21e4
58.05898
  • 58.05898
  • 55.90488
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
56.36131
  • 56.36131
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
55.80023
  • 55.80023
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
55.63074
  • 55.63074
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.23e4
  • 1.23e4
54.98056
  • 54.98056
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
54.89565
  • 54.89565
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
53.35879
  • 53.35879
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
53.16548
  • 53.16548
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
  • 1.43e4
52.65127
  • 52.65127
  • 47.99621
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
51.35595
  • 51.35595
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07053580, CH473949
EnsemblENSRNOG00000000169 (Spata5l1)
RGD1595990 (Spata5l1)
Uniprot/SPTREMBLD4A2B7, D4A2B7_RAT

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