R. norvegicus Gene: Jmjd6 - ENSRNOG00000000250 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000250
NameJmjd6
Descriptionjumonji domain containing 6 [Source:RGD Symbol;Acc:1305395]
OrganismRattus norvegicus (rat)
Synonym(s)loc360665, ptdsr

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
2.99e3
  • 2.99e3
88.84849
  • 88.84849
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.44e3
  • 5.44e3
79.69295
  • 79.69295
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
5.94e3
  • 5.94e3
77.80205
  • 77.80205
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
6.98e3
  • 6.98e3
73.92923
  • 73.92923
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
7.25e3
  • 7.25e3
72.92991
  • 72.92991
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
7.52e3
  • 7.52e3
71.88839
  • 71.88839
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
7.63e3
  • 7.63e3
71.49750
  • 71.49750
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
8.42e3
  • 8.42e3
68.53109
  • 68.53109
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
9.49e3
  • 9.49e3
64.53830
  • 64.53830
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.51e4
  • 1.51e4
  • 1.51e4
43.69945
  • 43.69945
  • 43.66455
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAABR03075342, AABR03077255, BC079012
EnsemblENSRNOG00000000250 (Jmjd6)
RGD1305395 (Jmjd6)
Uniprot/SWISSPROTJMJD6_RAT, Q6AYK2

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