R. norvegicus Gene: Jmjd6 - ENSRNOG00000000250 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000250
NameJmjd6
Descriptionjumonji domain containing 6 [Source:RGD Symbol;Acc:1305395]
OrganismRattus norvegicus (rat)
Synonym(s)loc360665, ptdsr

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.95e3
  • 2.95e3
  • 7.19e3
89.26028
  • 89.26028
  • 73.77539
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
4.66e3
  • 4.66e3
83.01054
  • 83.01054
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.03e3
  • 5.03e3
81.66539
  • 81.66539
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
5.09e3
  • 5.09e3
81.42452
  • 81.42452
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
5.32e3
  • 5.32e3
80.59062
  • 80.59062
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
5.57e3
  • 5.57e3
79.68111
  • 79.68111
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
5.94e3
  • 5.94e3
78.33034
  • 78.33034
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
6.16e3
  • 6.16e3
77.53277
  • 77.53277
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
6.22e3
  • 6.22e3
77.30601
  • 77.30601
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
6.24e3
  • 6.24e3
77.24795
  • 77.24795
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
6.70e3
  • 6.70e3
75.56596
  • 75.56596
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
6.73e3
  • 6.73e3
75.44038
  • 75.44038
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
6.84e3
  • 6.84e3
75.03815
  • 75.03815
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
7.09e3
  • 7.09e3
74.13422
  • 74.13422
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
7.13e3
  • 7.13e3
  • 7.27e3
74.00058
  • 74.00058
  • 73.49787
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
7.25e3
  • 7.25e3
73.57326
  • 73.57326
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
7.41e3
  • 7.41e3
72.97403
  • 72.97403
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.42e3
  • 7.42e3
  • 8.70e3
72.92512
  • 72.92512
  • 68.28745
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
7.58e3
  • 7.58e3
72.37356
  • 72.37356
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
8.42e3
  • 8.42e3
69.28435
  • 69.28435
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.54e4
  • 1.54e4
  • 1.54e4
43.96944
  • 43.96944
  • 43.93471
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAABR03075342, AABR03077255, BC079012
EnsemblENSRNOG00000000250 (Jmjd6)
RGD1305395 (Jmjd6)
Uniprot/SWISSPROTJMJD6_RAT, Q6AYK2

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