R. norvegicus Gene: Rtn4ip1 - ENSRNOG00000000279 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000279
NameRtn4ip1
Descriptionreticulon 4 interacting protein 1 [Source:RGD Symbol;Acc:1563384]
OrganismRattus norvegicus (rat)
Synonym(s)loc309912, rgd1563384, rgd1563384_predicted

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
3.12e3
  • 3.12e3
88.62035
  • 88.62035
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.74e3
  • 4.74e3
82.71255
  • 82.71255
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
5.40e3
  • 5.40e3
80.29515
  • 80.29515
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
6.52e3
  • 6.52e3
76.22074
  • 76.22074
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
7.03e3
  • 7.03e3
74.35029
  • 74.35029
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
7.49e3
  • 7.49e3
72.67385
  • 72.67385
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
7.59e3
  • 7.59e3
72.33282
  • 72.33282
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
8.13e3
  • 8.13e3
70.36558
  • 70.36558
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
8.33e3
  • 8.33e3
69.62735
  • 69.62735
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
8.39e3
  • 8.39e3
  • 8.89e3
69.41992
  • 69.41992
  • 67.56910
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
8.40e3
  • 8.40e3
69.37750
  • 69.37750
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
8.65e3
  • 8.65e3
68.45581
  • 68.45581
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
8.74e3
  • 8.74e3
68.11402
  • 68.11402
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.76e3
  • 8.76e3
  • 1.07e4
68.05632
  • 68.05632
  • 60.87522
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
8.94e3
  • 8.94e3
67.39581
  • 67.39581
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
9.84e3
  • 9.84e3
64.13174
  • 64.13174
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
9.90e3
  • 9.90e3
  • 1.01e4
63.89733
  • 63.89733
  • 63.00120
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
60.72853
  • 60.72853
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
60.64307
  • 60.64307
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
  • 1.27e4
54.89656
  • 54.89656
  • 53.74403
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
54.41186
  • 54.41186
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07045484, AABR07045485, BC166465, CH474025
EnsemblENSRNOG00000000279 (Rtn4ip1)
RGD1563384 (Rtn4ip1)
Uniprot/SPTREMBLB2GUZ6, B2GUZ6_RAT

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