R. norvegicus Gene: Scarf2 - ENSRNOG00000000288 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000288
NameScarf2
Descriptionscavenger receptor class F, member 2 [Source:RGD Symbol;Acc:1306013]
OrganismRattus norvegicus (rat)
Synonym(s)loc287949, scarf2_predicted

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.76e3
  • 2.76e3
  • 1.20e4
89.93325
  • 89.93325
  • 56.08870
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
3.55e3
  • 3.55e3
87.06215
  • 87.06215
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
6.37e3
  • 6.37e3
76.76307
  • 76.76307
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.79e3
  • 7.79e3
  • 1.66e4
71.59427
  • 71.59427
  • 39.27505
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
8.54e3
  • 8.54e3
68.83809
  • 68.83809
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
8.62e3
  • 8.62e3
68.55444
  • 68.55444
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
8.81e3
  • 8.81e3
67.85447
  • 67.85447
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
9.08e3
  • 9.08e3
66.88186
  • 66.88186
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
9.11e3
  • 9.11e3
66.78094
  • 66.78094
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
9.75e3
  • 9.75e3
64.45705
  • 64.45705
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
9.85e3
  • 9.85e3
64.08265
  • 64.08265
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
9.86e3
  • 9.86e3
64.02316
  • 64.02316
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
9.98e3
  • 9.98e3
63.60601
  • 63.60601
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
61.48014
  • 61.48014
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
60.08925
  • 60.08925
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
60.06131
  • 60.06131
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
  • 1.22e4
59.04169
  • 59.04169
  • 55.33647
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
  • 1.23e4
55.98472
  • 55.98472
  • 55.27498
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
54.77751
  • 54.77751
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.38e4
  • 1.38e4
49.63895
  • 49.63895
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07034754, CH473999
EnsemblENSRNOG00000000288 (Scarf2)
RGD1306013 (Scarf2)
Uniprot/SPTREMBLD3ZBQ5, D3ZBQ5_RAT

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