R. norvegicus Gene: Mical1 - ENSRNOG00000000307 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000307
NameMical1
Descriptionmicrotubule associated monooxygenase, calponin and LIM domain containing 1 [Source:RGD Symbol;Acc:1309386]
OrganismRattus norvegicus (rat)
Synonym(s)d3zjd1, loc294520, mical-1, nical

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.42e3
  • 1.42e3
94.81431
  • 94.81431
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
3.01e3
  • 3.01e3
89.03677
  • 89.03677
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
3.31e3
  • 3.31e3
87.94128
  • 87.94128
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
3.50e3
  • 3.50e3
87.24332
  • 87.24332
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
4.35e3
  • 4.35e3
84.13109
  • 84.13109
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
5.38e3
  • 5.38e3
80.37670
  • 80.37670
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
7.61e3
  • 7.61e3
72.23555
  • 72.23555
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.07e3
  • 8.07e3
  • 1.24e4
70.56206
  • 70.56206
  • 54.90396
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
9.14e3
  • 9.14e3
66.67367
  • 66.67367
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
9.35e3
  • 9.35e3
65.89127
  • 65.89127
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
9.87e3
  • 9.87e3
64.00711
  • 64.00711
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
9.99e3
  • 9.99e3
63.58157
  • 63.58157
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
62.37521
  • 62.37521
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.04e4
  • 1.04e4
  • 1.18e4
62.16946
  • 62.16946
  • 56.99803
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
61.21344
  • 61.21344
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
58.10993
  • 58.10993
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
  • 1.26e4
55.64285
  • 55.64285
  • 53.95357
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
54.56724
  • 54.56724
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.31e4
  • 1.31e4
52.28446
  • 52.28446
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
51.66400
  • 51.66400
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
1.35e4
  • 1.35e4
  • 1.37e4
50.69497
  • 50.69497
  • 50.20845
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCH474025
EnsemblENSRNOG00000000307 (Mical1)
RGD1309386 (Mical1)
Uniprot/SWISSPROTD3ZBP4, MICA1_RAT

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