R. norvegicus Gene: Rnf5 - ENSRNOG00000000438 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000438
NameRnf5
Descriptionring finger protein 5, E3 ubiquitin protein ligase [Source:RGD Symbol;Acc:1588458]
OrganismRattus norvegicus (rat)
Synonym(s)mgc109637

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
834
  • 834
96.96032
  • 96.96032
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
890
  • 890
96.75778
  • 96.75778
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
1.22e3
  • 1.22e3
  • 2.65e3
95.56002
  • 95.56002
  • 90.33793
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.34e3
  • 1.34e3
95.10767
  • 95.10767
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.45e3
  • 1.45e3
  • 2.07e3
94.71496
  • 94.71496
  • 92.44038
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.47e3
  • 1.47e3
94.63515
  • 94.63515
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.74e3
  • 1.74e3
93.64526
  • 93.64526
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.77e3
  • 1.77e3
93.53496
  • 93.53496
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.80e3
  • 1.80e3
93.45297
  • 93.45297
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.84e3
  • 1.84e3
93.30565
  • 93.30565
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.96e3
  • 1.96e3
  • 2.25e3
92.84743
  • 92.84743
  • 91.79028
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.99e3
  • 1.99e3
92.73929
  • 92.73929
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.49e3
  • 2.49e3
90.91768
  • 90.91768
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.50e3
  • 2.50e3
  • 6.05e3
90.87428
  • 90.87428
  • 77.94365
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.62e3
  • 2.62e3
90.44990
  • 90.44990
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
2.72e3
  • 2.72e3
90.09797
  • 90.09797
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
2.85e3
  • 2.85e3
89.59934
  • 89.59934
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.90e3
  • 2.90e3
89.40843
  • 89.40843
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
2.99e3
  • 2.99e3
89.10318
  • 89.10318
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
3.32e3
  • 3.32e3
87.88474
  • 87.88474
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
3.44e3
  • 3.44e3
87.46384
  • 87.46384
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
4.35e3
  • 4.35e3
  • 4.37e3
84.15122
  • 84.15122
  • 84.06565
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLBC088341
EnsemblENSRNOG00000000438 (Rnf5)
RGD1588458 (Rnf5)
Uniprot/SPTREMBLA0A0G2JWX8, A0A0G2JWX8_RAT
Uniprot/SWISSPROTQ5M807, RNF5_RAT

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