R. norvegicus Gene: RT1-Ba - ENSRNOG00000000451 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000451
NameRT1-Ba
DescriptionRT1 class II, locus Ba [Source:RGD Symbol;Acc:1595867]
OrganismRattus norvegicus (rat)
Synonym(s)arrb2-ps, ba1, ba1gn,gn hla-dmb,gn rt1-bb,gn rt1-db1,gn rt1-dob,gn tap2, mgc105667, rt1-ba_mapped

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
118
  • 118
99.57446
  • 99.57446
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
407
  • 407
98.51858
  • 98.51858
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
483
  • 483
98.24379
  • 98.24379
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
551
  • 551
97.99508
  • 97.99508
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
764
  • 764
97.21691
  • 97.21691
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
798
  • 798
97.09454
  • 97.09454
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
837
  • 837
96.94967
  • 96.94967
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.35e3
  • 1.35e3
95.09461
  • 95.09461
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
1.60e3
  • 1.60e3
  • 3.93e3
94.16647
  • 94.16647
  • 85.66422
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.64e3
  • 1.64e3
94.02925
  • 94.02925
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.79e3
  • 1.79e3
93.47533
  • 93.47533
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.78e3
  • 2.78e3
89.84995
  • 89.84995
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
2.84e3
  • 2.84e3
89.65587
  • 89.65587
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.51e3
  • 3.51e3
  • 9.12e3
87.20867
  • 87.20867
  • 66.74049
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.58e3
  • 3.58e3
  • 1.17e4
86.94241
  • 86.94241
  • 57.31021
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
4.23e3
  • 4.23e3
84.57884
  • 84.57884
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
4.69e3
  • 4.69e3
82.88142
  • 82.88142
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
5.45e3
  • 5.45e3
80.14093
  • 80.14093
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.65e3
  • 6.65e3
  • 1.25e4
75.73808
  • 75.73808
  • 54.24105
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
6.80e3
  • 6.80e3
75.21447
  • 75.21447
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
7.21e3
  • 7.21e3
73.71430
  • 73.71430
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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