R. norvegicus Gene: RT1-DOb - ENSRNOG00000000454 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000454
NameRT1-DOb
DescriptionRT1 class II, locus DOb [Source:RGD Symbol;Acc:1595814]
OrganismRattus norvegicus (rat)
Synonym(s)arrb2-ps, dob, dobgn,gn hla-dmb,gn rt1-ba,gn rt1-da,gn rt1-db2,gn tap2, h2-ob, rt1-bb2, rt1-dob_mapped

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
991
  • 991
96.39071
  • 96.39071
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
5.84e3
  • 5.84e3
78.71985
  • 78.71985
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
6.30e3
  • 6.30e3
77.03720
  • 77.03720
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
6.43e3
  • 6.43e3
76.56469
  • 76.56469
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
8.68e3
  • 8.68e3
68.33822
  • 68.33822
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
9.33e3
  • 9.33e3
65.98340
  • 65.98340
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
63.03505
  • 63.03505
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
57.73046
  • 57.73046
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.17e4
  • 1.17e4
57.16329
  • 57.16329
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
56.61754
  • 56.61754
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
55.54200
  • 55.54200
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.23e4
  • 1.23e4
55.05843
  • 55.05843
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
53.72036
  • 53.72036
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
  • 1.75e4
50.35164
  • 50.35164
  • 36.12620
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
47.74417
  • 47.74417
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.52e4
  • 1.52e4
44.53077
  • 44.53077
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.65e4
  • 1.65e4
39.72692
  • 39.72692
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
38.96830
  • 38.96830
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.73e4
  • 1.73e4
36.78269
  • 36.78269
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAC098547, BX883043, CH473988, KC222915
EnsemblENSRNOG00000000454 (RT1-DOb)
RGD1595814 (RT1-DOb)
Uniprot/SPTREMBLQ6MGA2, Q6MGA2_RAT

Do not show this banner again