R. norvegicus Gene: Tap2 - ENSRNOG00000000455 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000455
NameTap2
Descriptiontransporter 2, ATP-binding cassette, sub-family B (MDR/TAP) [Source:RGD Symbol;Acc:3818]
OrganismRattus norvegicus (rat)
Synonym(s)abcb3, apt2, arrb2-ps, cim, hla-dma, hla-dmb, loc103689996gn, mgc108646, psmb9, rt1-ba, rt1-bb, rt1-da, rt1-db1,gn rt1-db2, rt1-dob, tap1, tesb

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
191
  • 191
99.30736
  • 99.30736
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.67e3
  • 2.67e3
90.26050
  • 90.26050
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
3.05e3
  • 3.05e3
88.89507
  • 88.89507
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
3.16e3
  • 3.16e3
88.47099
  • 88.47099
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
3.79e3
  • 3.79e3
86.19462
  • 86.19462
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
4.54e3
  • 4.54e3
  • 5.78e3
83.44833
  • 83.44833
  • 78.92279
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
5.27e3
  • 5.27e3
80.76518
  • 80.76518
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
5.93e3
  • 5.93e3
78.38545
  • 78.38545
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
7.06e3
  • 7.06e3
74.23861
  • 74.23861
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
7.16e3
  • 7.16e3
73.88555
  • 73.88555
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
7.70e3
  • 7.70e3
71.92406
  • 71.92406
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
8.48e3
  • 8.48e3
69.08320
  • 69.08320
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
8.51e3
  • 8.51e3
68.97480
  • 68.97480
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
9.22e3
  • 9.22e3
66.36171
  • 66.36171
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
9.23e3
  • 9.23e3
  • 1.22e4
66.34935
  • 66.34935
  • 55.51184
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
9.27e3
  • 9.27e3
66.17774
  • 66.17774
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
9.73e3
  • 9.73e3
64.53139
  • 64.53139
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
  • 1.14e4
62.32823
  • 62.32823
  • 58.30766
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
60.85972
  • 60.85972
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
59.22088
  • 59.22088
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
  • 1.38e4
53.58719
  • 53.58719
  • 49.56304
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07044414, AC098547, BC091140, BX883043, CH473988, KC222910
EnsemblENSRNOG00000000455 (Tap2)
RGD3818 (Tap2), 9419934 (LOC103689996)
Uniprot/SPTREMBLQ6MGA3, Q6MGA3_RAT

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