R. norvegicus Gene: B3galt4 - ENSRNOG00000000471 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000471
NameB3galt4
DescriptionUDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4 [Source:RGD Symbol;Acc:620328]
OrganismRattus norvegicus (rat)
Synonym(s)aa926063, b3gal-t4, beta3gal-t4, beta3galt4, cdk2ap1-ps1gn, daxxgn, gal-t2, kifc1gn,gn loc224733l-2,gn rps25-ps1,gn rt1-a2,gn rt1-doa,gn rt1-ke4,gn sacm2l-ps1, mgc156596, sacm2l-ps2gn, syngap1gn

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
5.86e3
  • 5.86e3
  • 8.10e3
78.62695
  • 78.62695
  • 70.44585
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
6.33e3
  • 6.33e3
76.90801
  • 76.90801
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
6.51e3
  • 6.51e3
76.25448
  • 76.25448
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
6.59e3
  • 6.59e3
75.96251
  • 75.96251
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
6.90e3
  • 6.90e3
74.82496
  • 74.82496
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
7.04e3
  • 7.04e3
74.32341
  • 74.32341
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.07e3
  • 7.07e3
  • 1.31e4
74.20214
  • 74.20214
  • 52.32483
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
8.01e3
  • 8.01e3
70.78550
  • 70.78550
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
9.10e3
  • 9.10e3
66.81271
  • 66.81271
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
9.19e3
  • 9.19e3
66.47740
  • 66.47740
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
62.31247
  • 62.31247
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
58.06791
  • 58.06791
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
56.21209
  • 56.21209
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
55.41817
  • 55.41817
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
54.31236
  • 54.31236
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
53.83532
  • 53.83532
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
53.81584
  • 53.81584
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
  • 1.39e4
53.76172
  • 53.76172
  • 49.15038
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
50.93198
  • 50.93198
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
  • 1.63e4
47.81340
  • 47.81340
  • 40.37568
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAC128962, BC126083, BX883042, CH473988
EnsemblENSRNOG00000000471 (B3galt4)
RGD620328 (B3galt4)
Uniprot/SPTREMBLQ6MGC2, Q6MGC2_RAT

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