R. norvegicus Gene: Syngap1 - ENSRNOG00000000483 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000483
NameSyngap1
Descriptionsynaptic Ras GTPase activating protein 1 [Source:RGD Symbol;Acc:621090]
OrganismRattus norvegicus (rat)
Synonym(s)syngap

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
715
  • 715
  • 1.59e3
97.39541
  • 97.39541
  • 94.18758
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.36e3
  • 1.36e3
  • 1.42e4
95.04213
  • 95.04213
  • 48.28026
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
6.68e3
  • 6.68e3
75.62567
  • 75.62567
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
9.15e3
  • 9.15e3
66.63552
  • 66.63552
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
9.34e3
  • 9.34e3
65.94449
  • 65.94449
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
9.61e3
  • 9.61e3
64.95725
  • 64.95725
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
9.89e3
  • 9.89e3
63.93329
  • 63.93329
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
60.43046
  • 60.43046
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
  • 1.36e4
59.55177
  • 59.55177
  • 50.51975
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
56.62308
  • 56.62308
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
56.33680
  • 56.33680
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
55.41007
  • 55.41007
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.23e4
  • 1.23e4
55.30332
  • 55.30332
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
54.84513
  • 54.84513
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
54.79064
  • 54.79064
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
53.73101
  • 53.73101
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
53.70515
  • 53.70515
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
  • 1.33e4
53.32301
  • 53.32301
  • 51.59831
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
52.63526
  • 52.63526
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.34e4
  • 1.34e4
51.25681
  • 51.25681
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
50.69045
  • 50.69045
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAC128962
EnsemblENSRNOG00000000483 (Syngap1)
RGD621090 (Syngap1)
Uniprot/SPTREMBLD3ZCL8, D3ZCL8_RAT, F1LQW8, F1LQW8_RAT

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