R. norvegicus Gene: Scube3 - ENSRNOG00000000500 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000500
NameScube3
Descriptionsignal peptide, CUB domain, EGF-like 3 [Source:RGD Symbol;Acc:1304880]
OrganismRattus norvegicus (rat)
Synonym(s)loc294297

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
6.61e3
  • 6.61e3
75.91166
  • 75.91166
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
8.01e3
  • 8.01e3
70.77350
  • 70.77350
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
58.16464
  • 58.16464
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
51.55922
  • 51.55922
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
  • 1.56e4
47.78320
  • 47.78320
  • 42.93395
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
47.67086
  • 47.67086
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
1.46e4
  • 1.46e4
  • 1.47e4
46.81183
  • 46.81183
  • 46.53182
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.50e4
  • 1.50e4
45.38491
  • 45.38491
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.53e4
  • 1.53e4
44.15797
  • 44.15797
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.57e4
  • 1.57e4
42.90863
  • 42.90863
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
  • 2.26e4
42.23299
  • 42.23299
  • 17.62593
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.61e4
  • 1.61e4
41.34406
  • 41.34406
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.61e4
  • 1.61e4
41.12277
  • 41.12277
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.63e4
  • 1.63e4
40.65405
  • 40.65405
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.66e4
  • 1.66e4
39.31247
  • 39.31247
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
39.04351
  • 39.04351
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.67e4
  • 1.67e4
39.03483
  • 39.03483
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.70e4
  • 1.70e4
38.07269
  • 38.07269
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.72e4
  • 1.72e4
37.33990
  • 37.33990
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.75e4
  • 1.75e4
36.03523
  • 36.03523
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAC132760
EnsemblENSRNOG00000000500 (Scube3)
RGD1304880 (Scube3)
Uniprot/SPTREMBLF1LV96, F1LV96_RAT

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