R. norvegicus Gene: Cdkn1a - ENSRNOG00000000521 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000521
NameCdkn1a
Descriptioncyclin-dependent kinase inhibitor 1A [Source:RGD Symbol;Acc:69328]
OrganismRattus norvegicus (rat)
Synonym(s)cip1, uv96, waf1, waf1gn

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
728
  • 728
97.34898
  • 97.34898
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.86e3
  • 1.86e3
93.21592
  • 93.21592
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
2.16e3
  • 2.16e3
92.14181
  • 92.14181
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
2.65e3
  • 2.65e3
90.32064
  • 90.32064
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
3.50e3
  • 3.50e3
87.22595
  • 87.22595
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
3.83e3
  • 3.83e3
86.01962
  • 86.01962
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
4.09e3
  • 4.09e3
85.09972
  • 85.09972
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
4.38e3
  • 4.38e3
84.02794
  • 84.02794
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
4.49e3
  • 4.49e3
83.64070
  • 83.64070
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
5.42e3
  • 5.42e3
80.22103
  • 80.22103
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.68e3
  • 5.68e3
  • 1.05e4
79.27198
  • 79.27198
  • 61.63793
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
5.71e3
  • 5.71e3
79.16158
  • 79.16158
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.97e3
  • 5.97e3
  • 6.58e3
78.21789
  • 78.21789
  • 75.99285
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
6.89e3
  • 6.89e3
74.86377
  • 74.86377
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
6.97e3
  • 6.97e3
74.57078
  • 74.57078
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
7.88e3
  • 7.88e3
  • 7.96e3
71.25127
  • 71.25127
  • 70.95970
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
9.25e3
  • 9.25e3
  • 1.06e4
66.26739
  • 66.26739
  • 61.34942
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
61.48922
  • 61.48922
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
59.21516
  • 59.21516
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
58.13940
  • 58.13940
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
56.51807
  • 56.51807
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.26e4
  • 1.26e4
  • 1.28e4
53.90944
  • 53.90944
  • 53.25637
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07044451, BC100620, CH473988, L41275, U24174
EnsemblENSRNOG00000000521 (Cdkn1a)
RGD69328 (Cdkn1a)
Uniprot/SPTREMBLQ64315, Q64315_RAT

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