R. norvegicus Gene: Cpne5 - ENSRNOG00000000522 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000522
NameCpne5
Descriptioncopine V [Source:RGD Symbol;Acc:1308021]
OrganismRattus norvegicus (rat)
Synonym(s)cpne5_predicted, loc309650

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.46e3
  • 1.46e3
  • 4.17e3
94.66389
  • 94.66389
  • 84.77860
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.33e3
  • 2.33e3
  • 4.36e3
91.51567
  • 91.51567
  • 84.09917
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.15e3
  • 9.15e3
  • 1.03e4
66.63643
  • 66.63643
  • 62.28982
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
9.48e3
  • 9.48e3
  • 9.76e3
65.42346
  • 65.42346
  • 64.39231
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
56.12324
  • 56.12324
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.38e4
  • 1.38e4
49.77204
  • 49.77204
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
46.88573
  • 46.88573
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.48e4
  • 1.48e4
45.97006
  • 45.97006
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.53e4
  • 1.53e4
44.12430
  • 44.12430
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.57e4
  • 1.57e4
42.69439
  • 42.69439
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.58e4
  • 1.58e4
42.33508
  • 42.33508
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.59e4
  • 1.59e4
42.03075
  • 42.03075
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.59e4
  • 1.59e4
41.97618
  • 41.97618
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.64e4
  • 1.64e4
40.36481
  • 40.36481
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.69e4
  • 1.69e4
38.52187
  • 38.52187
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.69e4
  • 1.69e4
38.47022
  • 38.47022
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.71e4
  • 1.71e4
37.54236
  • 37.54236
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.73e4
  • 1.73e4
37.01645
  • 37.01645
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.75e4
  • 1.75e4
36.35456
  • 36.35456
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.76e4
  • 1.76e4
35.66276
  • 35.66276
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.81e4
  • 1.81e4
33.90309
  • 33.90309
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.84e4
  • 1.84e4
33.06478
  • 33.06478
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07044454, AABR07044455, AM747282, CH473988
EnsemblENSRNOG00000000522 (Cpne5)
RGD1308021 (Cpne5)
Uniprot/SPTREMBLD3ZGN2, D3ZGN2_RAT

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