R. norvegicus Gene: RGD1305587 - ENSRNOG00000000551 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000551
NameRGD1305587
Descriptionsimilar to RIKEN cDNA 2010107G23 [Source:RGD Symbol;Acc:1305587]
OrganismRattus norvegicus (rat)
Synonym(s)loc294499, rgd1305587_predicted

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
1.60e3
  • 1.60e3
  • 2.93e3
94.16577
  • 94.16577
  • 89.33410
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
2.02e3
  • 2.02e3
92.63833
  • 92.63833
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
2.22e3
  • 2.22e3
91.91257
  • 91.91257
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.71e3
  • 2.71e3
  • 2.77e3
90.11693
  • 90.11693
  • 89.89857
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.06e3
  • 3.06e3
88.86020
  • 88.86020
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
3.37e3
  • 3.37e3
87.72189
  • 87.72189
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
3.48e3
  • 3.48e3
87.32017
  • 87.32017
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
3.54e3
  • 3.54e3
87.10760
  • 87.10760
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
3.63e3
  • 3.63e3
86.76091
  • 86.76091
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
3.79e3
  • 3.79e3
86.19276
  • 86.19276
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
4.84e3
  • 4.84e3
82.35449
  • 82.35449
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.28e3
  • 6.28e3
  • 8.15e3
77.08345
  • 77.08345
  • 70.26662
AEIR
  • AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
6.48e3
  • 6.48e3
76.35700
  • 76.35700
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
6.61e3
  • 6.61e3
75.88179
  • 75.88179
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
7.35e3
  • 7.35e3
73.19182
  • 73.19182
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
7.36e3
  • 7.36e3
73.15673
  • 73.15673
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
8.92e3
  • 8.92e3
67.48722
  • 67.48722
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
60.75792
  • 60.75792
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
54.84707
  • 54.84707
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
52.53357
  • 52.53357
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07045018, BC158618, CH474016
EnsemblENSRNOG00000000551 (RGD1305587)
RGD1305587 (RGD1305587)
Uniprot/SPTREMBLB0BMZ1, B0BMZ1_RAT

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