R. norvegicus Gene: Col13a1 - ENSRNOG00000000552 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000552
NameCol13a1
Descriptioncollagen, type XIII, alpha 1 [Source:RGD Symbol;Acc:1595704]
OrganismRattus norvegicus (rat)
Synonym(s)loc499431

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
3.82e3
  • 3.82e3
86.06058
  • 86.06058
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
9.51e3
  • 9.51e3
  • 9.69e3
65.30529
  • 65.30529
  • 64.66419
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
9.94e3
  • 9.94e3
  • 1.40e4
63.75971
  • 63.75971
  • 49.07266
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
58.71459
  • 58.71459
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.17e4
  • 1.17e4
57.33479
  • 57.33479
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 1.39e4
57.13452
  • 57.13452
  • 49.31776
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
56.18350
  • 56.18350
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
56.04450
  • 56.04450
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
55.88190
  • 55.88190
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
55.44006
  • 55.44006
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
55.34088
  • 55.34088
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.29e4
  • 1.29e4
52.95554
  • 52.95554
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.29e4
  • 1.29e4
52.90167
  • 52.90167
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.31e4
  • 1.31e4
52.28183
  • 52.28183
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
51.80133
  • 51.80133
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
50.85633
  • 50.85633
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.39e4
  • 1.39e4
49.30802
  • 49.30802
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.45e4
  • 1.45e4
47.09852
  • 47.09852
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.62e4
  • 1.62e4
41.03432
  • 41.03432
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.91e4
  • 1.91e4
  • 2.26e4
30.46573
  • 30.46573
  • 17.62593
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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