R. norvegicus Gene: Lrrc20 - ENSRNOG00000000560 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000560
NameLrrc20
Descriptionleucine rich repeat containing 20 [Source:RGD Symbol;Acc:1566140]
OrganismRattus norvegicus (rat)
Synonym(s)loc499430, rgd1566140, rgd1566140_predicted

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
503
  • 503
98.16869
  • 98.16869
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
617
  • 617
97.75256
  • 97.75256
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.13e3
  • 1.13e3
95.88635
  • 95.88635
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
3.55e3
  • 3.55e3
87.04096
  • 87.04096
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.43e3
  • 5.43e3
  • 1.16e4
80.20571
  • 80.20571
  • 57.51213
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
6.48e3
  • 6.48e3
  • 9.39e3
76.35478
  • 76.35478
  • 65.75030
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
7.60e3
  • 7.60e3
72.26768
  • 72.26768
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
7.76e3
  • 7.76e3
71.68954
  • 71.68954
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
9.83e3
  • 9.83e3
64.16570
  • 64.16570
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.00e4
  • 1.00e4
63.37473
  • 63.37473
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
62.53419
  • 62.53419
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
  • 1.09e4
61.74676
  • 61.74676
  • 60.08673
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
60.64351
  • 60.64351
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
  • 1.66e4
60.29836
  • 60.29836
  • 39.54528
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
59.33260
  • 59.33260
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
58.94248
  • 58.94248
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
58.79035
  • 58.79035
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
58.38786
  • 58.38786
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.17e4
  • 1.17e4
57.40183
  • 57.40183
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.17e4
  • 1.17e4
57.17631
  • 57.17631
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
56.73699
  • 56.73699
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.67e4
  • 1.67e4
  • 1.68e4
39.02032
  • 39.02032
  • 38.85035
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

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