R. norvegicus Gene: Tbata - ENSRNOG00000000564 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000564
NameTbata
Descriptionthymus, brain and testes associated [Source:RGD Symbol;Acc:1561665]
OrganismRattus norvegicus (rat)
Synonym(s)loc499429, rgd1561665

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
163
  • 163
99.41073
  • 99.41073
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.25e3
  • 1.25e3
  • 3.13e3
95.44823
  • 95.44823
  • 88.58373
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
7.08e3
  • 7.08e3
74.17661
  • 74.17661
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
54.29303
  • 54.29303
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
  • 1.66e4
48.08637
  • 48.08637
  • 39.31546
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
  • 2.04e4
46.79819
  • 46.79819
  • 25.46767
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
45.75486
  • 45.75486
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
45.50053
  • 45.50053
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.50e4
  • 1.50e4
45.27155
  • 45.27155
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.57e4
  • 1.57e4
42.72980
  • 42.72980
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.63e4
  • 1.63e4
40.56002
  • 40.56002
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.69e4
  • 1.69e4
38.43590
  • 38.43590
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.73e4
  • 1.73e4
36.86395
  • 36.86395
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.77e4
  • 1.77e4
35.45982
  • 35.45982
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.78e4
  • 1.78e4
35.00609
  • 35.00609
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.86e4
  • 1.86e4
32.00321
  • 32.00321
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.99e4
  • 1.99e4
27.33724
  • 27.33724
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
2.02e4
  • 2.02e4
26.18532
  • 26.18532
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.03e4
  • 2.03e4
26.05777
  • 26.05777
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
2.05e4
  • 2.05e4
25.14896
  • 25.14896
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07044998
EnsemblENSRNOG00000000564 (Tbata)
RGD1561665 (Tbata)
Uniprot/SPTREMBLD3ZGK3, D3ZGK3_RAT, F1LZT3, F1LZT3_RAT

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