R. norvegicus Gene: Sgpl1 - ENSRNOG00000000565 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000565
NameSgpl1
Descriptionsphingosine-1-phosphate lyase 1 [Source:RGD Symbol;Acc:628599]
OrganismRattus norvegicus (rat)
Synonym(s)s1pl, spgl1, spl, spl 1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.77e3
  • 1.77e3
93.53
  • 93.53
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.95e3
  • 1.95e3
92.90
  • 92.90
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
2.01e3
  • 2.01e3
92.68
  • 92.68
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
2.81e3
  • 2.81e3
  • 4.11e3
89.74
  • 89.74
  • 85.02
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
2.98e3
  • 2.98e3
89.12
  • 89.12
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
3.10e3
  • 3.10e3
88.69
  • 88.69
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
3.66e3
  • 3.66e3
86.65
  • 86.65
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.33e3
  • 4.33e3
  • 5.67e3
84.22
  • 84.22
  • 79.33
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
4.34e3
  • 4.34e3
84.17
  • 84.17
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
4.40e3
  • 4.40e3
83.95
  • 83.95
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
4.40e3
  • 4.40e3
83.95
  • 83.95
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.64e3
  • 4.64e3
  • 5.23e3
83.08
  • 83.08
  • 80.93
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
4.67e3
  • 4.67e3
82.98
  • 82.98
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
4.68e3
  • 4.68e3
82.95
  • 82.95
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
5.44e3
  • 5.44e3
80.16
  • 80.16
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
6.05e3
  • 6.05e3
77.93
  • 77.93
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
6.71e3
  • 6.71e3
75.54
  • 75.54
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
6.82e3
  • 6.82e3
75.12
  • 75.12
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
7.24e3
  • 7.24e3
73.61
  • 73.61
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.74e3
  • 8.74e3
  • 1.01e4
68.11
  • 68.11
  • 63.28
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.10e4
  • 1.10e4
  • 1.12e4
59.77
  • 59.77
  • 59.28
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAJ512838
EnsemblENSRNOG00000000565 (Sgpl1)
RGD628599 (Sgpl1)
Uniprot/SWISSPROTQ8CHN6, SGPL1_RAT

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