R. norvegicus Gene: Pcbd1 - ENSRNOG00000000566 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000566
NamePcbd1
Descriptionpterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha [Source:RGD Symbol;Acc:3263]
OrganismRattus norvegicus (rat)
Synonym(s)dcoh, p70519, p80095, pcbd, pcd, phs, q9d930, tcf1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
329
  • 329
  • 402
98.80301
  • 98.80301
  • 98.53715
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
496
  • 496
98.19470
  • 98.19470
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
530
  • 530
98.07145
  • 98.07145
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.12e3
  • 1.12e3
  • 8.44e3
95.92953
  • 95.92953
  • 69.20662
AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.75e3
  • 2.75e3
89.97793
  • 89.97793
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
2.93e3
  • 2.93e3
89.30124
  • 89.30124
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
3.61e3
  • 3.61e3
86.82219
  • 86.82219
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
3.84e3
  • 3.84e3
86.01492
  • 86.01492
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
3.90e3
  • 3.90e3
85.79184
  • 85.79184
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.51e3
  • 5.51e3
  • 1.06e4
79.91027
  • 79.91027
  • 61.25295
AEIR
  • AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
5.65e3
  • 5.65e3
79.41139
  • 79.41139
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
7.08e3
  • 7.08e3
74.18835
  • 74.18835
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
7.22e3
  • 7.22e3
73.68563
  • 73.68563
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
7.85e3
  • 7.85e3
71.37765
  • 71.37765
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.94e3
  • 7.94e3
  • 9.27e3
71.03509
  • 71.03509
  • 66.20480
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
8.01e3
  • 8.01e3
70.79254
  • 70.79254
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
8.68e3
  • 8.68e3
68.35080
  • 68.35080
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
9.47e3
  • 9.47e3
65.45541
  • 65.45541
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
9.71e3
  • 9.71e3
64.58037
  • 64.58037
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
51.71755
  • 51.71755
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.41e4
  • 1.41e4
  • 1.42e4
48.54379
  • 48.54379
  • 48.32710
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.49e4
  • 1.49e4
45.66692
  • 45.66692
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAJ005542, L04537, M83740
EnsemblENSRNOG00000000566 (Pcbd1)
RGD3263 (Pcbd1)
Uniprot/SWISSPROTP61459, PHS_RAT

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