R. norvegicus Gene: Gtf3c6 - ENSRNOG00000000586 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000586
NameGtf3c6
Descriptiongeneral transcription factor IIIC, polypeptide 6, alpha [Source:RGD Symbol;Acc:1307434]
OrganismRattus norvegicus (rat)
Synonym(s)loc361858, rgd1307434, rgd1307434_predicted

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
3.63e3
  • 3.63e3
86.75639
  • 86.75639
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
3.63e3
  • 3.63e3
86.74676
  • 86.74676
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
3.75e3
  • 3.75e3
  • 4.57e3
86.31696
  • 86.31696
  • 83.31922
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
3.78e3
  • 3.78e3
86.20732
  • 86.20732
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
3.89e3
  • 3.89e3
85.80549
  • 85.80549
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.04e3
  • 4.04e3
85.25926
  • 85.25926
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
4.31e3
  • 4.31e3
84.28723
  • 84.28723
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
4.33e3
  • 4.33e3
84.21669
  • 84.21669
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
4.44e3
  • 4.44e3
83.81676
  • 83.81676
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
4.58e3
  • 4.58e3
83.28406
  • 83.28406
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
4.60e3
  • 4.60e3
83.21129
  • 83.21129
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
4.81e3
  • 4.81e3
82.45224
  • 82.45224
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
4.93e3
  • 4.93e3
82.03571
  • 82.03571
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
5.04e3
  • 5.04e3
81.62031
  • 81.62031
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
5.14e3
  • 5.14e3
81.25929
  • 81.25929
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
5.18e3
  • 5.18e3
81.12361
  • 81.12361
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
5.24e3
  • 5.24e3
80.88810
  • 80.88810
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.24e3
  • 5.24e3
  • 6.93e3
80.87938
  • 80.87938
  • 74.71711
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
5.51e3
  • 5.51e3
79.89959
  • 79.89959
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.41e3
  • 8.41e3
  • 9.20e3
69.34749
  • 69.34749
  • 66.45027
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.47e4
  • 1.47e4
  • 1.47e4
46.38272
  • 46.38272
  • 46.24127
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07045373, BC159437, CH474051
EnsemblENSRNOG00000000586 (Gtf3c6)
RGD1307434 (Gtf3c6)
Uniprot/SPTREMBLB0K037, B0K037_RAT

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