R. norvegicus Gene: Traf3ip2 - ENSRNOG00000000595 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000595
NameTraf3ip2
DescriptionTraf3 interacting protein 2 [Source:RGD Symbol;Acc:1593240]
OrganismRattus norvegicus (rat)
Synonym(s)loc294437, mgc112844, mgc112844 {eco:0000313|embl:edl87824.1,gn eco:0000313|rgd:1593240}, rgd1304768

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
4.93e3
  • 4.93e3
82.00591
  • 82.00591
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
4.95e3
  • 4.95e3
81.95951
  • 81.95951
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
4.98e3
  • 4.98e3
81.85319
  • 81.85319
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
4.98e3
  • 4.98e3
81.83718
  • 81.83718
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
5.36e3
  • 5.36e3
80.44954
  • 80.44954
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
5.45e3
  • 5.45e3
80.12532
  • 80.12532
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
5.57e3
  • 5.57e3
79.68279
  • 79.68279
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
5.65e3
  • 5.65e3
79.41131
  • 79.41131
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
6.03e3
  • 6.03e3
78.00204
  • 78.00204
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
6.37e3
  • 6.37e3
76.76416
  • 76.76416
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
6.59e3
  • 6.59e3
  • 6.84e3
75.95754
  • 75.95754
  • 75.06591
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
6.85e3
  • 6.85e3
75.00580
  • 75.00580
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
6.95e3
  • 6.95e3
74.66182
  • 74.66182
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
7.32e3
  • 7.32e3
73.31583
  • 73.31583
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
61.06051
  • 61.06051
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.07e4
  • 1.07e4
60.91852
  • 60.91852
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
60.01244
  • 60.01244
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
  • 1.38e4
57.52635
  • 57.52635
  • 49.52431
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
  • 1.54e4
56.30448
  • 56.30448
  • 43.97038
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
54.74775
  • 54.74775
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
  • 1.41e4
51.95164
  • 51.95164
  • 48.57716
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07045351, AABR07045352, BC100099, CH474051
EnsemblENSRNOG00000000595 (Traf3ip2)
RGD1593240 (Traf3ip2)
Uniprot/SPTREMBLQ498R8, Q498R8_RAT

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