R. norvegicus Gene: Hdac2 - ENSRNOG00000000604 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000604
NameHdac2
Descriptionhistone deacetylase 2 [Source:RGD Symbol;Acc:619976]
OrganismRattus norvegicus (rat)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.09e3
  • 1.09e3
96.02334
  • 96.02334
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.21e3
  • 1.21e3
95.58289
  • 95.58289
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.24e3
  • 1.24e3
95.46632
  • 95.46632
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.57e3
  • 1.57e3
  • 3.45e3
94.28212
  • 94.28212
  • 87.42620
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.65e3
  • 1.65e3
93.98355
  • 93.98355
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.81e3
  • 1.81e3
93.39815
  • 93.39815
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
1.98e3
  • 1.98e3
92.77197
  • 92.77197
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.98e3
  • 1.98e3
92.76857
  • 92.76857
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.10e3
  • 2.10e3
  • 3.46e3
92.34417
  • 92.34417
  • 87.39523
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
2.21e3
  • 2.21e3
  • 2.41e3
91.95003
  • 91.95003
  • 91.22727
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
2.24e3
  • 2.24e3
91.82121
  • 91.82121
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
2.37e3
  • 2.37e3
91.35620
  • 91.35620
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.38e3
  • 2.38e3
91.31247
  • 91.31247
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.40e3
  • 2.40e3
91.26608
  • 91.26608
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.44e3
  • 2.44e3
91.09078
  • 91.09078
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
2.47e3
  • 2.47e3
91.01236
  • 91.01236
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
2.48e3
  • 2.48e3
90.97057
  • 90.97057
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
2.77e3
  • 2.77e3
89.91538
  • 89.91538
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
2.86e3
  • 2.86e3
89.56188
  • 89.56188
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034920infant stage
3.03e3
  • 3.03e3
  • 4.04e3
88.93573
  • 88.93573
  • 85.25032
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
3.08e3
  • 3.08e3
88.75869
  • 88.75869
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07045321, CH474051
EnsemblENSRNOG00000000604 (Hdac2)
RGD619976 (Hdac2)
Uniprot/SPTREMBLF7ENH8, F7ENH8_RAT

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