R. norvegicus Gene: RGD1306739 - ENSRNOG00000000634 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000634
NameRGD1306739
Descriptionsimilar to RIKEN cDNA 1700040L02 [Source:RGD Symbol;Acc:1306739]
OrganismRattus norvegicus (rat)
Synonym(s)loc361834, rgd1306739_predicted

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
426
  • 426
  • 512
98.45103
  • 98.45103
  • 98.13619
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.80e3
  • 1.80e3
93.42280
  • 93.42280
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
3.01e3
  • 3.01e3
89.02954
  • 89.02954
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.18e3
  • 4.18e3
84.75650
  • 84.75650
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.40e3
  • 4.40e3
  • 9.33e3
83.95156
  • 83.95156
  • 65.96159
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
4.89e3
  • 4.89e3
82.15034
  • 82.15034
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
6.33e3
  • 6.33e3
76.92005
  • 76.92005
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
7.85e3
  • 7.85e3
71.35854
  • 71.35854
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.95e3
  • 7.95e3
  • 1.01e4
71.02360
  • 71.02360
  • 63.25546
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
8.31e3
  • 8.31e3
69.68158
  • 69.68158
AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
9.46e3
  • 9.46e3
65.49765
  • 65.49765
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
9.71e3
  • 9.71e3
64.58088
  • 64.58088
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
1.00e4
  • 1.00e4
63.45005
  • 63.45005
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
63.15129
  • 63.15129
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
62.46562
  • 62.46562
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
60.03680
  • 60.03680
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
1.10e4
  • 1.10e4
  • 1.10e4
59.95072
  • 59.95072
  • 59.82708
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
56.83379
  • 56.83379
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.23e4
  • 1.23e4
55.25404
  • 55.25404
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
53.57173
  • 53.57173
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
50.94314
  • 50.94314
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
1.57e4
  • 1.57e4
42.76044
  • 42.76044
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAABR07044805, AABR07044806, AABR07044807, CH473988
EnsemblENSRNOG00000000634 (RGD1306739)
RGD1306739 (RGD1306739)
Uniprot/SPTREMBLD3ZD36, D3ZD36_RAT

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