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R. norvegicus Gene: Coro1c - ENSRNOG00000000697 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000697
NameCoro1c
Descriptioncoronin, actin binding protein 1C [Source:RGD Symbol;Acc:1564490]
OrganismRattus norvegicus (rat)
Synonym(s)loc501841, rgd1564490, rgd1564490_predicted
Orthologs(s)24 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.22e3
  • 1.22e3
  • 3.07e3
95.55
  • 95.55
  • 88.82
AEIR
  • AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
1.73e3
  • 1.73e3
93.70
  • 93.70
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
1.74e3
  • 1.74e3
93.66
  • 93.66
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
2.00e3
  • 2.00e3
92.73
  • 92.73
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.12e3
  • 2.12e3
92.28
  • 92.28
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
2.20e3
  • 2.20e3
91.98
  • 91.98
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
2.50e3
  • 2.50e3
90.91
  • 90.91
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.70e3
  • 2.70e3
  • 3.28e3
90.15
  • 90.15
  • 88.04
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
2.84e3
  • 2.84e3
89.67
  • 89.67
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0000113post-juvenile adult stage
3.62e3
  • 3.62e3
86.80
  • 86.80
AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
3.66e3
  • 3.66e3
86.68
  • 86.68
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
3.71e3
  • 3.71e3
86.48
  • 86.48
AEIR
  • AEIR
UBERON:0002107liver
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0034920infant stage
  • UBERON:0000113post-juvenile adult stage
3.96e3
  • 3.96e3
  • 5.22e3
  • 5.25e3
85.59
  • 85.59
  • 80.97
  • 80.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
3.98e3
  • 3.98e3
85.49
  • 85.49
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0000113post-juvenile adult stage
  • RnorDv:00000194-6-month-old stage (rat)
4.00e3
  • 4.00e3
  • 4.01e3
85.44
  • 85.44
  • 85.41
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
4.51e3
  • 4.51e3
83.58
  • 83.58
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
4.67e3
  • 4.67e3
82.99
  • 82.99
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
4.86e3
  • 4.86e3
82.30
  • 82.30
AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
5.24e3
  • 5.24e3
80.90
  • 80.90
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
5.67e3
  • 5.67e3
79.35
  • 79.35
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.61e3
  • 7.61e3
  • 1.17e4
72.29
  • 72.29
  • 57.31
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Murinae1 species1 geneCompare expression
Rodentia2 species2 genesCompare expression
Glires3 species3 genesCompare expression
Euarchontoglires7 species7 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSRNOG00000000697.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata3 genesCompare expression
Eumetazoa5 genesCompare expression

Paralogy information comes from OMA : ENSRNOG00000000697.

Cross-references

EnsemblENSRNOG00000000697 (Coro1c)
RGD1564490 (Coro1c)
EMBLAABR07036567, CH473973
Uniprot/SPTREMBLG3V624, G3V624_RAT

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