R. norvegicus Gene: Vars - ENSRNOG00000000867 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000867
NameVars
Descriptionvalyl-tRNA synthetase [Source:RGD Symbol;Acc:3950]
OrganismRattus norvegicus (rat)
Synonym(s)bat6, g7a, q6mg65, trsval, valrs, vars2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
471
  • 471
98.24473
  • 98.24473
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
2.08e3
  • 2.08e3
92.21596
  • 92.21596
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.94e3
  • 2.94e3
89.01076
  • 89.01076
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
4.14e3
  • 4.14e3
84.52608
  • 84.52608
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
4.49e3
  • 4.49e3
83.21368
  • 83.21368
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
4.71e3
  • 4.71e3
82.41978
  • 82.41978
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
5.63e3
  • 5.63e3
78.97470
  • 78.97470
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
5.63e3
  • 5.63e3
78.95348
  • 78.95348
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
8.13e3
  • 8.13e3
69.62677
  • 69.62677
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
  • 1.22e4
54.63668
  • 54.63668
  • 54.45670
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

EMBLAC094348, BX883045, M98327
EnsemblENSRNOG00000000867 (Vars)
RGD3950 (Vars)
Uniprot/SPTREMBLA0A0G2JVG2, A0A0G2JVG2_RAT
Uniprot/SWISSPROTQ04462, SYVC_RAT

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