R. norvegicus Gene: Slc7a1 - ENSRNOG00000000924 - Rattus norvegicus (rat)

General information

Ensembl IDENSRNOG00000000924
NameSlc7a1
Descriptionsolute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:RGD Symbol;Acc:3716]
OrganismRattus norvegicus (rat)
Synonym(s)atrc1, cat-1, cat1, err

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001954Ammon's horn
  • RnorDv:00000194-6-month-old stage (rat)
  • UBERON:0000113post-juvenile adult stage
6.78e3
  • 6.78e3
  • 7.05e3
74.67206
  • 74.67206
  • 73.68069
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
9.79e3
  • 9.79e3
63.42639
  • 63.42639
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
60.55578
  • 60.55578
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
57.93577
  • 57.93577
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
56.62095
  • 56.62095
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
53.55619
  • 53.55619
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
50.53269
  • 50.53269
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
49.62379
  • 49.62379
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.58e4
  • 1.58e4
40.96813
  • 40.96813
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO

Cross-references

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